Data Model version 2.1.2
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Class: AtomSysName


    'sysName' is the systematic name for the ChemAtom or ChemAtomSet with name 'atomName' and subType atomSubType according to the naming system 'namingSystem'. 'atomName' and atomSubTypecan be used to identify the ChemAtom(Set) involved.
Attributes
Link Attributes
Attribute Methods
Link Attribute Methods
Class Methods
Factory Methods
Other Methods
Appendix

Inheritance:


Details:

Parent: link namingSystem to class NamingSystem
Main key: atomName, atomSubType
Mandatory Attributes: atomName, sysName
Known Subclasses: None
Children: None
Constructor: newObj = AtomSysName( namingSystem,atomName=value, sysName=value, ... )

Attributes (in package)

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Attribute Type Multiplicity Description
altSysNames Line 0..* Alternative systematic names - for naming systems that allow them. E.g. XPLOR that allows both HB*, HB#, HB+, etc. for pseudoatoms.  
atomName Word 1..1 name of ChemAtom or ChemAtomSet the systematic name applies to.  
atomSubType Int 1..1 subType of ChemAtom or ChemAtomSet the systematic name applies to.  
sysName Line 1..1 Systematic name of ChemAtom (or ChemAtomSet)  

Inherited Attributes (not in package): applicationDataclassNamefieldNamesinConstructorisDeletedmetaclasspackageNamepackageShortNamequalifiedName

Link Attributes (in package)

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Attribute Type Multiplicity Description
namingSystem NamingSystem 1..1 (Parent link). parent link  
parent NamingSystem 1..1 link to parent object - synonym for namingSystem  

Inherited Attributes (not in package): accessactiveAccessroottopObject

Attribute Methods (in package)

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Attribute Method Return Parameters Comment
altSysNames
getAltSysNames Line Tuple -
setAltSysNames - Line List
addAltSysName - Line
removeAltSysName - Line
atomName
getAtomName Word -
setAtomName - Word
atomSubType
getAtomSubType Int -
setAtomSubType - Int
sysName
getSysName Line -
setSysName - Line

Link Attribute Methods (in package)

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Attribute Method Return Parameters Comment
namingSystem
getNamingSystem NamingSystem -
parent
getParent NamingSystem -

Class Methods (in package)

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Method Return Parameters Comment
checkValid - Boolean
checkAllValid - Boolean
getByKey AtomSysName memops.api.Implementation.MemopsObject, Any List static
getFullKey Any List Boolean
getLocalKey Any -
get Any String
set - String, Any

Factory Methods (in package)

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Method Return Parameters
None

Other Methods (in package)

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Method Return Parameters Comment
None

Appendix

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guid:

www.ccpn.ac.uk_Fogh_2006-08-16-14:22:52_00002

isImplicit:

False

Tag

Value
repositoryId $Id: $

Tag

Value
repositoryTag $Name: $

Special constructor code:

None

Special destructor code:

None

Special postDestructor code:

None

Constraints:

None
Known inward one-way links: None
  Data Model Version 2.1.2
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Fri Mar 28 11:18:03 2014    from data model package  ccp.api.molecule.ChemComp.AtomSysName   revision ?  
  Work done by the CCPN team.
www.ccpn.ac.uk