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Class: RefStereochemistry


    Stereochemistry type (e.g. tetrahedral, allene-like, ...) following SMILES conventions.
Attributes
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Attribute Methods
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Class Methods
Factory Methods
Other Methods
Appendix

Inheritance:


Details:

Parent: link stereochemistryStore to class StereochemistryStore
Main key: serial
Mandatory Attributes: numAtoms, numCoreAtoms, stereoClass, values
Known Subclasses: None
Children: None
Constructor: newObj = RefStereochemistry( stereochemistryStore,numAtoms=value, numCoreAtoms=value, stereoClass=value, values=value, ... )

Attributes (in package)

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Attribute Type Multiplicity Description
details String 0..1 Description of stereochemistry, including details on what the various values mean.  
numAtoms Int 1..1 number of atoms for stereochemistry definition. E.g. 4 for tetrahedral, 2 for double bond.  
numCoreAtoms Int 1..1 number of core atoms for stereochemistry definition. E.g. 1 for tetrahedral, 2 for double bond.  
serial Int 1..1 Serial number of object. Serves as object main key. Serial numbers of deleted objects are not re-used. Serial numbers can only be set by the implementation. Values are in practice always positive, since negative values are interpreted as a signal to set the next free serial  
stereoClass Word 1..1 name of stereochemistry type.  
values Word 2..* Permitted values for the stereochemistry specification. For IUPAC tetrahedral stereochemistry, the values would correspond to 'R' and 'S'.  

Inherited Attributes (not in package): applicationDataclassNamefieldNamesinConstructorisDeletedmetaclasspackageNamepackageShortNamequalifiedName

Link Attributes (in package)

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Attribute Type Multiplicity Description
parent StereochemistryStore 1..1 link to parent object - synonym for stereochemistryStore  
stereochemistryStore StereochemistryStore 1..1 (Parent link). parent link  

Inherited Attributes (not in package): accessactiveAccessroottopObject

Attribute Methods (in package)

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Attribute Method Return Parameters Comment
details
getDetails String -
setDetails - String
numAtoms
getNumAtoms Int -
setNumAtoms - Int
numCoreAtoms
getNumCoreAtoms Int -
setNumCoreAtoms - Int
serial
getSerial Int -
setSerial - Int
stereoClass
getStereoClass Word -
setStereoClass - Word
values
getValues Word Tuple -
setValues - Word List
addValue - Word
removeValue - Word

Link Attribute Methods (in package)

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Attribute Method Return Parameters Comment
parent
getParent StereochemistryStore -
stereochemistryStore
getStereochemistryStore StereochemistryStore -

Class Methods (in package)

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Method Return Parameters Comment
checkValid - Boolean
checkAllValid - Boolean
getByKey RefStereochemistry memops.api.Implementation.MemopsObject, Any List static
getFullKey Any List Boolean
getLocalKey Any -
get Any String
set - String, Any

Factory Methods (in package)

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Method Return Parameters
None

Other Methods (in package)

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Method Return Parameters Comment
None

Appendix

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guid:

www.ccpn.ac.uk_Fogh_2006-08-16-14:22:52_00055

isImplicit:

False

Tag

Value
repositoryId $Id: $

Tag

Value
repositoryTag $Name: $

Special constructor code:

None

Special destructor code:

None

Special postDestructor code:

None

Constraints:

None
Known inward one-way links: ccp.api.molecule.ChemComp.Stereochemistry.refStereochemistry
  Data Model Version 2.1.2
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Fri Mar 28 11:18:00 2014    from data model package  ccp.api.molecule.Stereochemistry.RefStereochemistry   revision ?  
  Work done by the CCPN team.
www.ccpn.ac.uk